TAP SWI/SNF_SNF2 in Funaria hygrometrica (Transcriptome)

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Funaria

Protein source: Szövényi et al. (2010) Mol Biol Evol 28:803


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SNF2_N
AP2
PHD
zf-CCCH
HMG_box
Myb_DNA-binding

(Domain names are clickable)



List of proteins (95)

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m240lflr_TR10804_c0_g1_i1_16_rc
m240lflr_TR10804_c0_g1_i2_22_rc
m240lflr_TR10804_c0_g1_i3_19_rc
m240lflr_TR10804_c0_g1_i4_19_rc
m240lflr_TR10922_c0_g1_i1_5_rc
m240lflr_TR13000_c0_g1_i2_3
m240lflr_TR13000_c0_g1_i3_2
m240lflr_TR13000_c0_g1_i4_2
m240lflr_TR13000_c0_g1_i6_3
m240lflr_TR13000_c0_g1_i7_2
m240lflr_TR13000_c0_g1_i9_2
m240lflr_TR15128_c0_g1_i1_4_rc
m240lflr_TR15192_c0_g1_i1_3
m240lflr_TR15192_c0_g1_i2_3
m240lflr_TR15192_c0_g1_i3_2
m240lflr_TR19204_c0_g1_i1_13_rc
m240lflr_TR19204_c0_g1_i2_13_rc
m240lflr_TR19204_c0_g1_i3_12_rc
m240lflr_TR21939_c0_g1_i10_11_rc
m240lflr_TR21939_c0_g1_i11_7_rc
m240lflr_TR21939_c0_g1_i1_9_rc
m240lflr_TR21939_c0_g1_i2_8_rc
m240lflr_TR21939_c0_g1_i3_10_rc
m240lflr_TR21939_c0_g1_i4_8_rc
m240lflr_TR21939_c0_g1_i5_7_rc
m240lflr_TR21939_c0_g1_i6_4_rc
m240lflr_TR21939_c0_g1_i7_10_rc
m240lflr_TR21939_c0_g1_i8_10_rc
m240lflr_TR21939_c0_g1_i9_9_rc
m240lflr_TR21990_c0_g2_i1_2
m240lflr_TR21990_c0_g2_i2_2
m240lflr_TR21990_c0_g3_i1_1
m240lflr_TR21990_c0_g3_i2_2
m240lflr_TR22006_c0_g1_i1_6
m240lflr_TR2210_c0_g1_i2_11_rc
m240lflr_TR2210_c0_g1_i3_12_rc
m240lflr_TR2210_c0_g1_i4_12_rc
m240lflr_TR22756_c1_g4_i1_19_rc
m240lflr_TR22775_c0_g1_i1_13_rc
m240lflr_TR22775_c0_g1_i2_17_rc
m240lflr_TR22775_c0_g1_i3_18_rc
m240lflr_TR22775_c0_g1_i4_14_rc
m240lflr_TR22775_c0_g1_i5_16_rc
m240lflr_TR22775_c0_g1_i6_19_rc
m240lflr_TR22775_c0_g1_i7_11_rc
m240lflr_TR22775_c0_g1_i8_12_rc
m240lflr_TR2389_c0_g1_i1_3
m240lflr_TR2389_c0_g2_i1_2
m240lflr_TR24398_c0_g1_i1_1
m240lflr_TR2536_c0_g1_i1_1
m240lflr_TR27422_c0_g1_i1_17_rc
m240lflr_TR27422_c0_g1_i2_9_rc
m240lflr_TR28243_c0_g1_i1_2_rc
m240lflr_TR29099_c0_g2_i1_8_rc
m240lflr_TR29106_c0_g1_i1_3
m240lflr_TR29355_c0_g1_i1_1
m240lflr_TR30747_c0_g1_i1_4
m240lflr_TR31608_c0_g1_i1_5
m240lflr_TR35511_c0_g2_i1_2
m240lflr_TR37318_c0_g1_i1_2
m240lflr_TR37318_c0_g1_i2_3
m240lflr_TR39210_c0_g1_i1_4_rc
m240lflr_TR40957_c0_g2_i1_6_rc
m240lflr_TR40957_c0_g2_i2_8_rc
m240lflr_TR40957_c0_g2_i3_7_rc
m240lflr_TR40957_c0_g2_i4_8_rc
m240lflr_TR4808_c0_g1_i1_2_rc
m240lflr_TR48684_c1_g2_i10_14_rc
m240lflr_TR48684_c1_g2_i5_10_rc
m240lflr_TR48754_c1_g8_i10_3_rc
m240lflr_TR48754_c1_g8_i1_3_rc
m240lflr_TR48754_c1_g8_i2_3_rc
m240lflr_TR48754_c1_g8_i3_3_rc
m240lflr_TR48754_c1_g8_i4_12_rc
m240lflr_TR48754_c1_g8_i5_3_rc
m240lflr_TR48754_c1_g8_i6_12_rc
m240lflr_TR48754_c1_g8_i8_3_rc
m240lflr_TR48754_c1_g8_i9_12_rc
m240lflr_TR50549_c0_g1_i1_16_rc
m240lflr_TR51826_c0_g1_i1_3
m240lflr_TR51826_c0_g1_i2_3
m240lflr_TR51826_c0_g1_i3_3
m240lflr_TR51826_c0_g1_i4_4
m240lflr_TR51826_c0_g1_i5_4
m240lflr_TR51826_c0_g1_i6_3
m240lflr_TR5403_c0_g1_i1_5_rc
m240lflr_TR5403_c0_g2_i1_9_rc
m240lflr_TR5403_c0_g2_i2_11_rc
m240lflr_TR5456_c0_g3_i1_6_rc
m240lflr_TR5456_c0_g3_i2_6_rc
m240lflr_TR6912_c0_g1_i1_14_rc
m240lflr_TR6912_c0_g1_i2_13_rc
m240lflr_TR981_c1_g1_i3_7
m240lflr_TR981_c1_g1_i4_2
m240lflr_TR981_c1_g1_i5_3
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum